Protein maturation by [4Fe-4S] cluster transfer

pathway activity — cross-omics
GO:0106035Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Protein maturation by [4Fe-4S] cluster transfer pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are IPO4, MIR503HG, and RN7SL630P, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIPO4 →+0.177+0.166.005.00433
UCECMIR503HG →-0.725-0.159.008.00633
UCECRN7SL630P →-0.723-0.220.001.00533
LUADRNU6-1336P →-0.760-0.138.009.00233
BRCACCDC110 →-0.371-0.064.006.00833
CCRCCCYCSP10 →-0.471-0.175.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration