"Ion channel modulating, G protein-coupled receptor signaling pathway"

pathway activity — cross-omics
GO:0099105Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "Ion channel modulating, G protein-coupled receptor signaling pathway" pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RPL7P8, ADGRE3, and IFITM2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRPL7P8 →-0.250-0.524<.001<.00134
PDACADGRE3 →+0.463+0.453.001.00534
UCECIFITM2 →+0.625+0.510<.001.00734
LSCCVNN2 →+0.841+0.653<.001<.00134
LSCCMIR223HG →+0.905+0.676.002<.00134
BRCACCDC112 →-0.420-0.559.002.00225
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration