"Neurotransmitter receptor transport, postsynaptic endosome to lysosome"

pathway activity — cross-omics
GO:0098943Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "Neurotransmitter receptor transport, postsynaptic endosome to lysosome" pathway is significantly associated with the RNA expression of multiple genes, with the MESO cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CACNG8, CACNG4, and SLC12A5, each associated with the pathway in up to 18 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
MESOCACNG8 →-0.622-0.142<.001<.001318
LAMLCACNG4 →-1.135-0.180<.001<.001218
UVMSLC12A5 →-1.030-0.158.007<.001315
UVMCACNG5 →-0.685-0.129<.001<.001315
SCLCAP3D1 →+1.777+0.970.001.002313
CHOLPCSK1N →-3.619-0.150<.001.001312
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration