"Neurotransmitter receptor transport, postsynaptic endosome to lysosome"

pathway activity — cross-omics
GO:0098943Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "Neurotransmitter receptor transport, postsynaptic endosome to lysosome" pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TBCB, ADAMTSL2, and CLIP2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTBCB →-0.216-0.136.002.00235
HNSCADAMTSL2 →-0.637-0.261.005.00935
HNSCCLIP2 →-0.229-0.228.003.00635
CCRCCTNS3 →-0.192-0.108<.001<.00126
COADSRP72 →+0.172+0.109<.001<.00135
GBMCAPG →-0.500-0.119<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration