Anterograde dendritic transport

pathway activity — tumor vs normal
GO:0098937Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Anterograde dendritic transport pathway differs between tumor and matched normal tissue in 13 of the 18 cancer types tested.

The strongest signal is observed in kidney chromophobe (KICH), where pathway activity is higher in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as HNSC, show the opposite pattern, with lower activity in tumor tissue.

KICH, KIRP, and HNSC show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
KICHMaleII,III,IV+0.111<.0019view →
KIRPMaleII,III,IV+0.089<.0019view →
HNSCMaleAll−0.059<.0018view →
LUADAllAll+0.044<.0018view →
UCECAllAll+0.093<.0016view →
BRCAAllII,III,IV+0.089<.0016view →
COADMaleAll+0.056<.0016view →
LIHCMaleAll+0.039<.0014view →
READFemaleAll+0.097<.0012view →
CHOLAllAll+0.076.0012view →
PRADAllAll+0.056<.0012view →
KIRCFemaleIV+0.054.0071view →
Pink = more active in tumor, green = less active in tumor. Showing the 12 strongest of 13 lineages.

GO:0098937–KICH

Tumor-vs-normal pathway-activity box plot for Anterograde dendritic transport in KICH.

Open the KICH breakdown →

Exploration