Membrane repolarization during ventricular cardiac muscle cell action potential

Across TCGA patient cohorts, RNA activity of the Membrane repolarization during ventricular cardiac muscle cell action potential pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are KCNQ1_S27, ABCE1, and MFSD6_T10, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Membrane repolarization during ventricular cardiac muscle cell action potential activity versus KCNQ1_S27 in COAD (Pearson r = 0.28).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	KCNQ1_S27 →	+1.598	+0.658	<.001	<.001	3	4
OV	ABCE1 →	-0.333	-0.412	<.001	.005	3	3
PDAC	MFSD6_T10 →	+0.451	+0.372	<.001	.001	3	3
LSCC	COBLL1_S351 →	+0.846	+0.379	.001	<.001	3	3
UCEC	NFATC2IP_S204 →	-0.277	-0.367	<.001	.001	3	3
HNSC	SMARCA2_S316 →	+1.179	+0.655	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0098915 vs KCNQ1_S27 — COAD

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