Positive regulation of mitophagy in response to mitochondrial depolarization

pathway activity — cross-omics
GO:0098779Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of mitophagy in response to mitochondrial depolarization pathway is significantly associated with the shRNA dependency of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are HUWE1, CDC37, and VDAC1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADHUWE1 →-0.608-0.519<.001<.00139
STOMACHCDC37 →-0.503-0.451.001<.00137
BREASTVDAC1 →-0.408-0.692<.001<.00137
OESOPHAGUSROGDI →-0.241-0.490<.001.00234
LUNG_NSCLC_LUSCSH3BP1 →-0.366-0.274.006.00634
SKINLMBR1L →-0.194-0.334.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration