Cell-cell adhesion via plasma-membrane adhesion molecules

pathway activity — cross-omics
GO:0098742Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cell-cell adhesion via plasma-membrane adhesion molecules pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FOXF1, ASPN, and FGF1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCFOXF1 →+0.592+0.393.002.00434
BRCAASPN →+1.176+0.621.001<.00134
BRCAFGF1 →+0.854+0.773<.001<.00134
BRCACNRIP1 →+0.919+0.940<.001<.00134
BRCAGLT8D2 →+0.742+0.536<.001<.00134
BRCAOMD →+1.149+0.693<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration