Maintenance of cell number

pathway activity — cross-omics
GO:0098727Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Maintenance of cell number pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CEP170, DBN1, and HCFC1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Maintenance of cell number activity versus CEP170 in GBM (Pearson r = 0.22).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCEP170 →+0.247+0.046.001<.00138
GBMDBN1 →+0.312+0.036<.001<.00138
HNSCHCFC1 →+0.179+0.053<.001<.00137
GBMPSMB10_S230 →-0.739-0.046<.001<.00137
HNSCXPO1 →+0.225+0.082<.001<.00136
GBMBRD3 →+0.401+0.039<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0098727 vs CEP170 — GBM

Per-sample scatter of Maintenance of cell number activity vs CEP170 in GBM.

Explore this scatter interactively →

Exploration