Protein maturation by iron-sulfur cluster transfer

pathway activity — cross-omics
GO:0097428Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Protein maturation by iron-sulfur cluster transfer pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are VSIG10, CCDC110, and HOXD11, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCVSIG10 →+0.481+0.108.008.00634
PDACCCDC110 →-0.459-0.182<.001.00134
UCECHOXD11 →-1.132-0.193<.001<.00133
UCECFOXD2 →-0.271-0.166<.001<.00133
GBMELFN1 →-0.924-0.153.001.00133
UCECNR2F1-AS1 →-0.833-0.170<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration