Establishment of Sertoli cell barrier

pathway activity — cross-omics
GO:0097368Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Establishment of Sertoli cell barrier pathway is significantly associated with the shRNA dependency of multiple genes, with the KIDNEY cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are IL1A, CD209, and RAB13, each associated with the pathway in up to 12 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYIL1A →-0.572-1.654<.001<.001312
BLOOD_LeukemiaCD209 →-0.336-0.804<.001.00434
URINARY_TRACTRAB13 →-0.300-2.210.007<.00116
BLOOD_LeukemiaIL1R1 →-0.226-0.670<.001.00633
STOMACHSNUPN →-0.216-1.284.005.00833
LUNG_NSCLC_LUADUSP40 →-0.363-0.922<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration