Activation of cysteine-type endopeptidase activity

pathway activity — cross-omics
GO:0097202Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Activation of cysteine-type endopeptidase activity pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PSMB9, FCER1G, and CEP68, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPSMB9 →+0.760+0.195<.001<.00137
LSCCFCER1G →+0.675+0.244<.001<.00136
LSCCCEP68 →-0.284-0.128.002.00136
LSCCGBP5 →+1.005+0.207<.001<.00136
LSCCTAP1 →+0.804+0.229<.001<.00136
LSCCFCGR3A →+0.653+0.221<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration