Type B pancreatic cell apoptotic process

pathway activity — cross-omics
GO:0097050Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Type B pancreatic cell apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are GSPT1, HIRIP3, and AGFG1_S181, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADGSPT1 →-0.191-0.037<.001.00436
GBMHIRIP3 →-0.390-0.071.001.00435
CCRCCAGFG1_S181 →+0.378+0.048.002.00435
LSCCCLPX →-0.343-0.081<.001<.00134
LSCCAKAP12_S612 →+0.680+0.045<.001.00334
OVGRPEL1 →-0.409-0.044.002.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration