Dendritic cell differentiation

Across TCGA patient cohorts, RNA activity of the Dendritic cell differentiation pathway is significantly associated with the RNA expression of multiple genes, with the LAML cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TLR8, MS4A4A, and ITK, each associated with the pathway in up to 33 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Dendritic cell differentiation activity versus TLR8 in LAML (Pearson r = 0.54).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LAML	TLR8 →	+2.641	+0.093	<.001	<.001	3	33
LAML	MS4A4A →	+2.216	+0.096	<.001	<.001	3	33
SCLC	ITK →	+1.916	+0.209	<.001	<.001	3	33
SKCM	FASLG →	+1.897	+0.075	<.001	<.001	3	33
LAML	CCR2 →	+2.074	+0.090	<.001	<.001	3	33
SKCM	FGL2 →	+2.392	+0.066	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0097028 vs TLR8 — LAML

Explore this scatter interactively →