Reversible differentiation

pathway activity — cross-omics
GO:0090677Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Reversible differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PXDN, P3H3, and PCOLCE, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPXDN →+0.480+0.065.001.002310
OVP3H3 →+0.675+0.073.001.00239
OVPCOLCE →+0.666+0.059<.001<.00139
UCECZYX →+0.478+0.127<.001<.00138
LUADCALD1_S131 →+0.327+0.054.004.00138
BRCASERPINH1 →+0.672+0.083<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration