Microglial cell mediated cytotoxicity

pathway activity — cross-omics
GO:0090634Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Microglial cell mediated cytotoxicity pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CYTH4, BTK, and BIN2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCYTH4 →+0.828+0.718.001<.00137
OVBTK →+1.013+0.831<.001<.00137
OVBIN2 →+0.916+0.821.001<.00137
OVHAVCR2 →+0.806+0.602.005.00537
OVGPR65 →+0.924+0.872<.001<.00137
OVGNGT2 →+0.775+0.851<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration