Acinar cell differentiation

pathway activity — cross-omics
GO:0090425Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Acinar cell differentiation pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PROX1, PLCL2, and SPATA18, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPROX1 →+0.726+0.317.001.00333
COADPLCL2 →-0.637-0.443.001.00133
COADSPATA18 →-0.669-0.467.001<.00133
COADTPRG1-AS1 →-0.168-0.358.005<.00133
PDACMIR4504 →-0.808-0.890<.001<.00133
OVASCC3 →-0.469-0.687.002.00732
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration