Fibroblast growth factor production

pathway activity — cross-omics
GO:0090269Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Fibroblast growth factor production pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TNFAIP6, RGCC, and ACVRL1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATNFAIP6 →+0.772+0.182<.001<.00137
CCRCCRGCC →+1.044+0.202<.001<.00137
OVACVRL1 →+0.779+0.649<.001.00237
BRCAFN1 →+1.192+0.227<.001<.00136
BRCACD93 →+0.567+0.192<.001<.00136
CCRCCKCNE4 →+0.896+0.177.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration