Positive regulation of microtubule nucleation

Across TCGA cell cohorts, RNA activity of the Positive regulation of microtubule nucleation pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NMB, ARHGEF19, and TMEM107, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, NMB grouped by Positive regulation of microtubule nucleation-low versus -high activity in LUNG_NSCLC_LUSC.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	NMB →	+2.710	+0.248	<.001	<.001	3	4
OESOPHAGUS	ARHGEF19 →	+1.391	+0.237	<.001	.003	3	4
OESOPHAGUS	TMEM107 →	+0.954	+0.203	<.001	<.001	3	4
OESOPHAGUS	PHPT1 →	+1.024	+0.307	.004	.007	3	4
LIVER	BPNT1 →	+0.848	+0.354	<.001	.001	3	4
BLOOD_Leukemia	C20orf144 →	+0.104	+0.151	.006	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

NMB by Positive regulation of microtubule nucleation activity — LUNG_NSCLC_LUSC

Explore this box plot interactively →