Liver morphogenesis

pathway activity — cross-omics
GO:0072576Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Liver morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MME, MMP19, and OMD, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMME →+0.988+0.637<.001<.00134
CCRCCMMP19 →+0.920+0.549<.001<.00134
BRCAOMD →+1.126+0.436<.001.00334
BRCAGEM →+1.008+0.826<.001<.00134
CCRCCKRTAP1-5 →+0.159+0.584.009<.00134
CCRCCRPS15AP24 →-0.432-0.496.002.00734
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration