Organelle transport along microtubule

Across TCGA patient cohorts, RNA activity of the Organelle transport along microtubule pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are MAP1B, MAP1B_S1378, and UCHL1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Organelle transport along microtubule activity versus MAP1B in LSCC (Pearson r = 0.40).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MAP1B →	+0.740	+0.030	<.001	<.001	3	7
LSCC	MAP1B_S1378 →	+0.724	+0.026	<.001	<.001	3	6
LSCC	UCHL1 →	+0.884	+0.032	<.001	<.001	3	6
LSCC	MAP1B_S1965 →	+0.882	+0.024	<.001	<.001	3	6
HNSC	MAP2_S862 →	+2.139	+0.079	<.001	.004	3	6
LSCC	S100A9_T113 →	-0.882	-0.028	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0072384 vs MAP1B — LSCC

Explore this scatter interactively →