Metanephric nephron tubule epithelial cell differentiation

pathway activity — cross-omics
GO:0072257Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Metanephric nephron tubule epithelial cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are C1R, C1S, and NID2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCC1R →+0.688+0.119<.001<.00138
OVC1S →+0.654+0.126<.001<.00138
UCECNID2 →+0.503+0.081.004.00938
GBMCOPZ2 →+0.773+0.168<.001<.00138
BRCARSU1 →+0.374+0.127<.001<.00137
BRCATPM4 →+0.354+0.061<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration