Ureter morphogenesis

pathway activity — cross-omics
GO:0072197Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Ureter morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RTKN2, PRORP, and ACAP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARTKN2 →+0.708+1.129<.001<.00134
LUADPRORP →+0.504+0.566<.001<.00134
GBMACAP3 →+0.641+0.552.003.00234
GBMCOG2 →+0.333+0.423<.001.00534
GBMBRD3 →+0.462+0.427<.001.00234
GBMEHMT1 →+0.335+0.381.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration