Nephron tubule epithelial cell differentiation

pathway activity — cross-omics
GO:0072160Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Nephron tubule epithelial cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PROM1, FKBP7, and WWTR1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPROM1 →+1.190+0.098.002.00137
BRCAFKBP7 →+0.378+0.041<.001.00236
BRCAWWTR1 →+0.407+0.046<.001<.00135
BRCAF13A1 →+0.504+0.046<.001<.00135
LUADWDR55 →-0.147-0.043.004.00326
UCECPXDN →+0.438+0.080<.001.00635
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration