Positive regulation of protein serine/threonine kinase activity

pathway activity — cross-omics
GO:0071902Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of protein serine/threonine kinase activity pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PLOD1, LRRC6, and SNX24, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of protein serine/threonine kinase activity activity versus PLOD1 in LUNG_SCLC (Pearson r = -0.51).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCPLOD1 →-1.146-0.724.001.00335
SOFT_TISSUELRRC6 →+2.226+1.454<.001.00135
BLOOD_LymphomaSNX24 →-1.254-0.606.005.00235
BLOOD_LeukemiaFAM162A →+0.523+0.672.005.00134
STOMACHFAM114A1 →-1.931-1.097.008.00734
BLOOD_MyelomaFECH →-1.366-1.266.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071902 vs PLOD1 — LUNG_SCLC

Per-sample scatter of Positive regulation of protein serine/threonine kinase activity activity vs PLOD1 in LUNG_SCLC.

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Exploration