Obsolete TNFSF11-mediated signaling pathway

pathway activity — cross-omics
GO:0071847Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete TNFSF11-mediated signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PLS1, SPTAN1, and SPTBN1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPLS1 →+0.522+0.076<.001<.00135
PDACSPTAN1 →+0.193+0.069.003<.00134
PDACSPTBN1 →+0.272+0.089.001<.00134
LSCCTNRC18_S1925 →+0.614+0.087<.001<.00134
LUADCDK12_S1083 →-0.343-0.097<.001<.00134
BRCARUNX1_T14 →-0.405-0.071.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration