Obsolete ER-associated misfolded protein catabolic process

pathway activity — cross-omics
GO:0071712Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete ER-associated misfolded protein catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ZCCHC24, ANLN, and CYP20A1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZCCHC24 →-1.026-0.131<.001<.00136
CCRCCANLN →+0.777+0.199.006.00235
CCRCCCYP20A1 →-0.283-0.209<.001.00235
BRCARBMS3 →-0.682-0.154<.001<.00135
CCRCCCMAHP →-0.426-0.193.005.00235
BRCAPODN →-1.166-0.144.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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