Mononuclear cell migration

pathway activity — cross-omics
GO:0071674Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Mononuclear cell migration pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Lymphoma cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DRAM1, TNFRSF12A, and STX4, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Mononuclear cell migration activity versus DRAM1 in BLOOD_Lymphoma (Pearson r = 0.62).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaDRAM1 →+2.403+0.380<.001<.00137
BLOOD_LymphomaTNFRSF12A →+2.003+0.301<.001.00137
BLOOD_LymphomaSTX4 →+1.195+0.390<.001<.00136
BLOOD_LymphomaRAB27A →+2.756+0.488<.001<.00136
BLOOD_LymphomaSTING1 →+6.018+0.464<.001<.00136
LIVERITGB3 →+3.202+0.322.001.00336
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071674 vs DRAM1 — BLOOD_Lymphoma

Per-sample scatter of Mononuclear cell migration activity vs DRAM1 in BLOOD_Lymphoma.

Explore this scatter interactively →

Exploration