Positive regulation of granulocyte chemotaxis

Across TCGA cell cohorts, RNA activity of the Positive regulation of granulocyte chemotaxis pathway is significantly associated with the RNA expression of multiple genes, with the URINARY_TRACT cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GPX1, DCAF16, and PNRC2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, GPX1 grouped by Positive regulation of granulocyte chemotaxis-low versus -high activity in URINARY_TRACT.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	GPX1 →	-1.133	-0.325	.007	.009	3	5
CNS	DCAF16 →	-0.484	-0.622	.008	.005	3	4
UPPER_AERODIGESTIVE_TRACT	PNRC2 →	-1.140	-0.314	<.001	.005	2	5
LUNG_NSCLC_LUAD	MINDY2 →	+0.459	+0.600	.005	.006	3	4
OESOPHAGUS	PYCARD →	+3.109	+0.206	.002	.008	3	3
OESOPHAGUS	GIMAP2 →	+1.061	+0.336	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GPX1 by Positive regulation of granulocyte chemotaxis activity — URINARY_TRACT

Explore this box plot interactively →