Chemokine (C-C motif) ligand 5 production

pathway activity — cross-omics
GO:0071609Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Chemokine (C-C motif) ligand 5 production pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are AMOTL2, ZNF502, and PPP4R1-AS1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACAMOTL2 →-0.373-0.617.007.00633
PDACZNF502 →-0.359-0.612.005.00633
PDACPPP4R1-AS1 →-0.432-0.489<.001.00133
COADCTDSPL →-0.388-0.503.004.00333
UCECHACL1 →-0.260-0.625.002.00133
UCECOXA1L →-0.365-0.510<.001.00324
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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