Cellular response to osmotic stress

pathway activity — cross-omics
GO:0071470Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular response to osmotic stress pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are COL8A1, MYLK, and MYL9, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cellular response to osmotic stress activity versus COL8A1 in OV (Pearson r = 0.37).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCOL8A1 →+2.319+0.208<.001<.00136
OVMYLK →+0.952+0.113<.001<.00136
OVMYL9 →+1.287+0.159<.001.00236
OVP4HA3 →+1.069+0.177<.001<.00136
OVLMOD1 →+1.484+0.167<.001<.00136
OVMAGI2-AS3 →+1.079+0.167<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071470 vs COL8A1 — OV

Per-sample scatter of Cellular response to osmotic stress activity vs COL8A1 in OV.

Explore this scatter interactively →

Exploration