Cellular response to water stimulus

pathway activity — cross-omics
GO:0071462Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular response to water stimulus pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CAP1, LGALS1, and TIMP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cellular response to water stimulus activity versus CAP1 in LSCC (Pearson r = 0.33).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCAP1 →+0.399+1.034<.001<.00135
LSCCLGALS1 →+0.864+0.884<.001.00234
PDACTIMP3 →+0.982+0.551<.001<.00134
LUADRRAS →+0.442+0.265<.001.00134
LSCCHTRA1 →+0.904+0.809<.001.00225
LSCCCAVIN1 →+0.785+0.992<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071462 vs CAP1 — LSCC

Per-sample scatter of Cellular response to water stimulus activity vs CAP1 in LSCC.

Explore this scatter interactively →

Exploration