Heterochromatin organization

pathway activity — cross-omics
GO:0070828Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Heterochromatin organization pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CTSG, SRPX, and MEDAG, each associated with the pathway in up to 2 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCTSG →-1.418-1.106.005.00432
OVSRPX →-1.845-1.244.003<.00132
OVMEDAG →-2.040-1.066.001<.00132
OVSEMA3G →-1.011-1.257<.001<.00132
OVMEIS3 →-1.650-1.113.001.00532
OVCOMP →-2.925-1.089<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration