Mast cell proliferation

pathway activity — cross-omics
GO:0070662Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Mast cell proliferation pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TBC1D2B, CLIC2, and FGF2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTBC1D2B →+0.358+0.108<.001<.00137
HNSCCLIC2 →+0.558+0.095<.001.00137
BRCAFGF2 →+0.645+0.071.001<.00137
UCECGIMAP7 →+0.492+0.130<.001<.00137
HNSCWIPF1 →+0.394+0.071<.001.00237
OVITGA1 →+0.550+0.052.002.00237
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration