Mast cell proliferation

pathway activity — cross-omics
GO:0070662Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Mast cell proliferation pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CRLF3, NF1, and OMG, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCRLF3 →+0.358+0.267.002<.00135
GBMNF1 →+0.532+0.288<.001<.00135
HNSCOMG →+0.684+0.183<.001.00534
HNSCRNU4-51P →+0.838+0.257.006<.00134
HNSCRPL5P24 →+0.899+0.186.003.00734
GBMSUZ12P1 →+0.450+0.273<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration