Cell-cell adhesion involved in gastrulation

pathway activity — cross-omics
GO:0070586Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cell-cell adhesion involved in gastrulation pathway is significantly associated with the RNA expression of multiple genes, with the LAML cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are KLF4, MBP, and ZCCHC2, each associated with the pathway in up to 26 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LAMLKLF4 →+1.985+0.094<.001<.001326
GBMMBP →+1.887+0.056<.001<.001322
DLBCZCCHC2 →+0.573+0.066.009<.001222
DLBCCSNK1A1 →+0.769+0.074.002.002220
CHOLIL1RN →+2.262+0.077<.001<.001319
DLBCKLF3 →+1.069+0.078<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration