ERK5 cascade

pathway activity — cross-omics
GO:0070375Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the ERK5 cascade pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are USP8, MAP2K5, and SMAD3, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAUSP8 →+0.154+0.035<.001.00236
BRCAMAP2K5 →+0.327+0.049.002.00436
BRCASMAD3 →+0.538+0.058<.001<.00135
BRCATP53BP1_S640 →+0.416+0.048<.001.00134
BRCACRYBG3 →-0.333-0.058.001.00134
BRCAEDEM3 →-0.280-0.051<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration