Renal sodium ion absorption

Across TCGA patient cohorts, RNA activity of the Renal sodium ion absorption pathway is significantly associated with the protein abundance of multiple proteins, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PRKG1, PCF11, and SNRNP200, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Renal sodium ion absorption activity versus PRKG1 in CCRCC (Pearson r = 0.50).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	PRKG1 →	+0.792	+0.135	<.001	<.001	3	9
BRCA	PCF11 →	-0.230	-0.047	<.001	.001	3	9
OV	SNRNP200 →	-0.238	-0.052	<.001	<.001	3	8
UCEC	BAZ1B_S349 →	-0.881	-0.079	<.001	<.001	3	8
LUAD	CDC20_T70 →	-0.953	-0.082	.003	.001	3	8
BRCA	PPM1F →	+0.295	+0.052	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0070294 vs PRKG1 — CCRCC

Explore this scatter interactively →