Extracellular matrix constituent secretion

pathway activity — cross-omics
GO:0070278Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Extracellular matrix constituent secretion pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are LAMB1, DYSF, and RFLNB, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVLAMB1 →+0.600+0.076.001<.00136
GBMDYSF →+0.522+0.081<.001<.00135
HNSCRFLNB →+0.377+0.054.005.00635
OVMAMDC2 →+0.534+0.064.003.00235
GBMMST1 →+0.607+0.071.001<.00135
CCRCCBUD23 →-0.167-0.060.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration