Negative regulation of astrocyte activation

Across TCGA patient cohorts, RNA activity of the Negative regulation of astrocyte activation pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RIPK3, HAVCR2, and AIF1, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of astrocyte activation activity versus RIPK3 in BRCA (Pearson r = 0.42).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	RIPK3 →	+1.549	+0.192	<.001	.006	2	3
GBM	HAVCR2 →	+1.032	+0.844	<.001	<.001	3	2
GBM	AIF1 →	+0.917	+0.792	.003	<.001	3	2
LSCC	VAT1 →	+0.836	+0.235	.001	<.001	3	2
LSCC	DUSP3 →	+0.452	+0.176	.002	.003	3	2
LSCC	RGS19 →	+0.520	+0.141	.004	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0061889 vs RIPK3 — BRCA

Explore this scatter interactively →