Detoxification of inorganic compound

pathway activity — cross-omics
GO:0061687Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Detoxification of inorganic compound pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are BUB3, RBM12, and SUPT6H, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Detoxification of inorganic compound activity versus BUB3 in PDAC (Pearson r = -0.47).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACBUB3 →-0.266-0.112<.001<.00139
COADRBM12 →-0.223-0.092<.001<.00139
GBMSUPT6H →-0.324-0.133<.001<.00138
BRCAVEZF1 →-0.530-0.070<.001<.00138
GBMZFR →-0.237-0.102<.001<.00138
LSCCPNN →-0.333-0.098<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0061687 vs BUB3 — PDAC

Per-sample scatter of Detoxification of inorganic compound activity vs BUB3 in PDAC.

Explore this scatter interactively →

Exploration