Testosterone biosynthetic process

pathway activity — cross-omics
GO:0061370Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Testosterone biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FGF2, MGP, and GINS1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACFGF2 →+0.450+0.142.002.00436
PDACMGP →+0.644+0.193<.001<.00135
LUADGINS1 →-0.543-0.159.003.00134
LUADPRDM5 →+0.405+0.177.007.00634
LUADDIAPH2 →+0.440+0.226.004<.00134
PDACZDHHC15 →+0.216+0.135.003.00734
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration