Smooth muscle cell-matrix adhesion

pathway activity — cross-omics
GO:0061302Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Smooth muscle cell-matrix adhesion pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TAGLN, ACTA2, and ITGA5, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTAGLN →+1.370+0.177<.001<.00137
OVACTA2 →+1.309+0.135.004.00537
GBMITGA5 →+0.932+0.140<.001.00537
HNSCLGALS1 →+0.906+0.151.005.00236
GBMFHL2 →+0.624+0.179<.001<.00136
GBMKRT17 →+0.688+0.137<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration