Myeloid leukocyte cytokine production

pathway activity — cross-omics
GO:0061082Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Myeloid leukocyte cytokine production pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MACIR, MTHFD1, and ABHD17B, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMACIR →-0.722-0.150<.001.00236
BRCAMTHFD1 →-0.258-0.162<.001.00135
BRCAABHD17B →-0.464-0.251.003<.00135
BRCAWDR35 →-0.605-0.172<.001<.00135
LSCCZC3HAV1L →-0.758-0.205<.001<.00135
LSCCMIPOL1 →-0.728-0.211.002<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration