Chaperone-mediated protein folding

pathway activity — cross-omics
GO:0061077Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Chaperone-mediated protein folding pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FCER1G, AMPD3, and FMNL1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAFCER1G →+0.706+0.040<.001<.00137
GBMAMPD3 →+0.428+0.050.006<.00137
PDACFMNL1 →+0.412+0.028<.001<.00136
BRCASTAT2 →+0.263+0.029.001<.00136
OVTHBS2 →+1.393+0.038<.001<.00136
LSCCUCHL1 →+0.963+0.048.002<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration