Regulation of branching involved in lung morphogenesis

pathway activity — cross-omics
GO:0061046Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of branching involved in lung morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PCF11, LINC01003, and CDC37L1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPCF11 →+0.439+0.237<.001<.00134
PDACLINC01003 →+0.295+0.158.002.00934
UCECCDC37L1 →+0.301+0.124.001.00133
PDACSSBP2 →+0.428+0.202<.001.00133
PDACOXR1 →+0.569+0.305<.001<.00133
UCECZNF226 →+0.438+0.199.006.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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