Negative regulation of wound healing

Across TCGA patient cohorts, RNA activity of the Negative regulation of wound healing pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GFPT2, LRRC32, and NLRP12, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of wound healing activity versus GFPT2 in COAD (Pearson r = 0.59).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	GFPT2 →	+1.148	+0.231	<.001	<.001	3	8
OV	LRRC32 →	+1.017	+0.169	<.001	<.001	3	8
GBM	NLRP12 →	+0.467	+0.209	<.001	<.001	3	8
COAD	COL15A1 →	+1.137	+0.180	<.001	<.001	3	8
COAD	FLT1 →	+0.978	+0.278	<.001	<.001	3	7
BRCA	SERPINE1 →	+1.404	+0.292	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0061045 vs GFPT2 — COAD

Explore this scatter interactively →