Mesenchymal cell proliferation involved in lung development

pathway activity — cross-omics
GO:0060916Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Mesenchymal cell proliferation involved in lung development pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TBX2, MIRLET7BHG, and HDAC1P2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTBX2 →+1.076+0.840.002.00235
GBMMIRLET7BHG →+0.538+0.599<.001.00234
GBMHDAC1P2 →+0.582+0.690.003.00134
BRCANFIB →+1.056+0.186<.001<.00134
BRCAZNF462 →+0.821+0.148<.001.00134
BRCARN7SL233P →+0.357+0.142.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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