Branching involved in labyrinthine layer morphogenesis

pathway activity — cross-omics
GO:0060670Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Branching involved in labyrinthine layer morphogenesis pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are MYH14, NECAP2, and ESRP2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMYH14 →+0.805+0.136<.001<.00136
LSCCNECAP2 →-0.204-0.098<.001<.00136
LSCCESRP2 →+0.355+0.077<.001<.00136
LSCCHOOK1 →+0.339+0.066<.001<.00136
LUADRGS10 →-0.376-0.070<.001<.00135
LSCCSASH3 →-0.334-0.078.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration