Intestinal epithelial cell maturation

pathway activity — cross-omics
GO:0060574Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Intestinal epithelial cell maturation pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MYBL2, SKA1, and SNRPD1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMYBL2 →+1.001+0.236.003.00935
UCECSKA1 →+0.895+0.264<.001.00435
LSCCSNRPD1 →+0.529+0.181<.001.00226
UCECAURKB →+0.855+0.206<.001.00235
LSCCWDHD1 →+0.644+0.188.001.00435
LUADPRR11 →+0.715+0.302<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration